dc.contributor.author |
Dheda, Keertan
|
en_ZA |
dc.contributor.author |
Van-Zyl Smit, Richard N
|
en_ZA |
dc.contributor.author |
Sechi, Leonardo A
|
en_ZA |
dc.contributor.author |
Badri, Motasim
|
en_ZA |
dc.contributor.author |
Meldau, Richard
|
en_ZA |
dc.contributor.author |
Symons, Gregory
|
en_ZA |
dc.contributor.author |
Khalfey, Hoosein
|
en_ZA |
dc.contributor.author |
Carr, Igshaan
|
en_ZA |
dc.contributor.author |
Maredza, Alice
|
en_ZA |
dc.contributor.author |
Dawson, Rodney
|
en_ZA |
dc.date.accessioned |
2016-01-11T06:51:38Z |
|
dc.date.available |
2016-01-11T06:51:38Z |
|
dc.date.issued |
2009 |
en_ZA |
dc.identifier.citation |
Dheda, K., Smit, R. N. V. Z., Sechi, L. A., Badri, M., Meldau, R., Symons, G., ... & Wainright, H. (2009). Clinical diagnostic utility of IP-10 and LAM antigen levels for the diagnosis of tuberculous pleural effusions in a high burden setting. PLoS ONE, 4(3), e4689. doi:10.1371/journal.pone.0004689 |
en_ZA |
dc.identifier.uri |
http://hdl.handle.net/11427/16251
|
|
dc.identifier.uri |
http://dx.doi.org/10.1371/journal.pone.0004689
|
|
dc.description.abstract |
BACKGROUND: Current tools for the diagnosis of tuberculosis pleural effusions are sub-optimal. Data about the value of new diagnostic technologies are limited, particularly, in high burden settings. Preliminary case control studies have identified IFN-γ-inducible-10kDa protein (IP-10) as a promising diagnostic marker; however, its diagnostic utility in a day-to-day clinical setting is unclear. Detection of LAM antigen has not previously been evaluated in pleural fluid. METHODS: We investigated the comparative diagnostic utility of established (adenosine deaminase [ADA]), more recent (standardized nucleic-acid-amplification-test [NAAT]) and newer technologies (a standardized LAM mycobacterial antigen-detection assay and IP-10 levels) for the evaluation of pleural effusions in 78 consecutively recruited South African tuberculosis suspects. All consenting participants underwent pleural biopsy unless contra-indicated or refused. The reference standard comprised culture positivity for M. tuberculosis or histology suggestive of tuberculosis. Principal FINDINGS: Of 74 evaluable subjects 48, 7 and 19 had definite, probable and non-TB, respectively. IP-10 levels were significantly higher in TB vs non-TB participants (p<0.0001). The respective outcomes [sensitivity, specificity, PPV, NPV %] for the different diagnostic modalities were: ADA at the 30 IU/L cut-point [96; 69; 90; 85], NAAT [6; 93; 67; 28], IP-10 at the 28,170 pg/ml ROC-derived cut-point [80; 82; 91; 64], and IP-10 at the 4035 pg/ml cut-point [100; 53; 83; 100]. Thus IP-10, using the ROC-derived cut-point, missed ∼20% of TB cases and mis-diagnosed ∼20% of non-TB cases. By contrast, when a lower cut-point was used a negative test excluded TB. The NAAT had a poor sensitivity but high specificity. LAM antigen-detection was not diagnostically useful. CONCLUSION: Although IP-10, like ADA, has sub-optimal specificity, it may be a clinically useful rule-out test for tuberculous pleural effusions. Larger multi-centric studies are now required to confirm our findings. |
en_ZA |
dc.language.iso |
eng |
en_ZA |
dc.publisher |
Public Library of Science |
en_ZA |
dc.rights |
This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
en_ZA |
dc.rights.uri |
http://creativecommons.org/licenses/by/4.0 |
en_ZA |
dc.source |
PLoS One |
en_ZA |
dc.source.uri |
http://journals.plos.org/plosone
|
en_ZA |
dc.subject.other |
Tuberculosis |
en_ZA |
dc.subject.other |
Tuberculosis diagnosis and management |
en_ZA |
dc.subject.other |
Pleural effusion |
en_ZA |
dc.subject.other |
Mycobacterium tuberculosis |
en_ZA |
dc.subject.other |
Biopsy |
en_ZA |
dc.subject.other |
Histology |
en_ZA |
dc.subject.other |
Diagnostic medicine |
en_ZA |
dc.subject.other |
HIV |
en_ZA |
dc.title |
Clinical diagnostic utility of IP-10 and LAM antigen levels for the diagnosis of tuberculous pleural effusions in a high burden setting |
en_ZA |
dc.type |
Journal Article |
en_ZA |
dc.rights.holder |
© 2009 Dheda et al |
en_ZA |
uct.type.publication |
Research |
en_ZA |
uct.type.resource |
Article
|
en_ZA |
dc.publisher.institution |
University of Cape Town |
|
dc.publisher.faculty |
Faculty of Health Sciences |
en_ZA |
dc.publisher.department |
Division of Pulmonology |
en_ZA |
uct.type.filetype |
Text |
|
uct.type.filetype |
Image |
|
dc.identifier.apacitation |
Dheda, K., Van-Zyl Smit, R. N., Sechi, L. A., Badri, M., Meldau, R., Symons, G., ... Dawson, R. (2009). Clinical diagnostic utility of IP-10 and LAM antigen levels for the diagnosis of tuberculous pleural effusions in a high burden setting. <i>PLoS One</i>, http://hdl.handle.net/11427/16251 |
en_ZA |
dc.identifier.chicagocitation |
Dheda, Keertan, Richard N Van-Zyl Smit, Leonardo A Sechi, Motasim Badri, Richard Meldau, Gregory Symons, Hoosein Khalfey, Igshaan Carr, Alice Maredza, and Rodney Dawson "Clinical diagnostic utility of IP-10 and LAM antigen levels for the diagnosis of tuberculous pleural effusions in a high burden setting." <i>PLoS One</i> (2009) http://hdl.handle.net/11427/16251 |
en_ZA |
dc.identifier.vancouvercitation |
Dheda K, Van-Zyl Smit RN, Sechi LA, Badri M, Meldau R, Symons G, et al. Clinical diagnostic utility of IP-10 and LAM antigen levels for the diagnosis of tuberculous pleural effusions in a high burden setting. PLoS One. 2009; http://hdl.handle.net/11427/16251. |
en_ZA |
dc.identifier.ris |
TY - Journal Article
AU - Dheda, Keertan
AU - Van-Zyl Smit, Richard N
AU - Sechi, Leonardo A
AU - Badri, Motasim
AU - Meldau, Richard
AU - Symons, Gregory
AU - Khalfey, Hoosein
AU - Carr, Igshaan
AU - Maredza, Alice
AU - Dawson, Rodney
AB - BACKGROUND: Current tools for the diagnosis of tuberculosis pleural effusions are sub-optimal. Data about the value of new diagnostic technologies are limited, particularly, in high burden settings. Preliminary case control studies have identified IFN-γ-inducible-10kDa protein (IP-10) as a promising diagnostic marker; however, its diagnostic utility in a day-to-day clinical setting is unclear. Detection of LAM antigen has not previously been evaluated in pleural fluid. METHODS: We investigated the comparative diagnostic utility of established (adenosine deaminase [ADA]), more recent (standardized nucleic-acid-amplification-test [NAAT]) and newer technologies (a standardized LAM mycobacterial antigen-detection assay and IP-10 levels) for the evaluation of pleural effusions in 78 consecutively recruited South African tuberculosis suspects. All consenting participants underwent pleural biopsy unless contra-indicated or refused. The reference standard comprised culture positivity for M. tuberculosis or histology suggestive of tuberculosis. Principal FINDINGS: Of 74 evaluable subjects 48, 7 and 19 had definite, probable and non-TB, respectively. IP-10 levels were significantly higher in TB vs non-TB participants (p<0.0001). The respective outcomes [sensitivity, specificity, PPV, NPV %] for the different diagnostic modalities were: ADA at the 30 IU/L cut-point [96; 69; 90; 85], NAAT [6; 93; 67; 28], IP-10 at the 28,170 pg/ml ROC-derived cut-point [80; 82; 91; 64], and IP-10 at the 4035 pg/ml cut-point [100; 53; 83; 100]. Thus IP-10, using the ROC-derived cut-point, missed ∼20% of TB cases and mis-diagnosed ∼20% of non-TB cases. By contrast, when a lower cut-point was used a negative test excluded TB. The NAAT had a poor sensitivity but high specificity. LAM antigen-detection was not diagnostically useful. CONCLUSION: Although IP-10, like ADA, has sub-optimal specificity, it may be a clinically useful rule-out test for tuberculous pleural effusions. Larger multi-centric studies are now required to confirm our findings.
DA - 2009
DB - OpenUCT
DO - 10.1371/journal.pone.0004689
DP - University of Cape Town
J1 - PLoS One
LK - https://open.uct.ac.za
PB - University of Cape Town
PY - 2009
T1 - Clinical diagnostic utility of IP-10 and LAM antigen levels for the diagnosis of tuberculous pleural effusions in a high burden setting
TI - Clinical diagnostic utility of IP-10 and LAM antigen levels for the diagnosis of tuberculous pleural effusions in a high burden setting
UR - http://hdl.handle.net/11427/16251
ER -
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en_ZA |