Browsing by Author "Gardner-Lubbe, Sugnet"

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Optimizing 16S rRNA gene profile analysis from low biomass nasopharyngeal and induced sputum specimens

Author: Claassen-Weitz, Shantelle ; Gardner-Lubbe, Sugnet ; Mwaikono, Kilaza S ; du Toit, Elloise ; Zar, Heather J ; Nicol, Mark P Date: 12 May 2020 Careful consideration of experimental artefacts is required in order to successfully apply high-throughput 16S ribosomal ribonucleic acid (rRNA) gene sequencing technology. Here we introduce experimental design, quality control and “denoising” ... Read more
Visualisation of quadratic discriminant analysis and its application in exploration of microbial interactions

Author: Gardner-Lubbe, Sugnet ; Dube, Felix S Date: 25 Feb 2015 Background: When comparing diseased and non-diseased patients in order to discriminate between the aspects associated with the specific disease, it is often observed that the diseased patients have more variability than the non-diseased ... Read more

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